refseqR - Common Computational Operations Working with RefSeq Entries (GenBank)

Fetches NCBI data (RefSeq <https://www.ncbi.nlm.nih.gov/refseq/> database) and provides an environment to extract information at the level of gene, mRNA or protein accessions.

Last updated 3 months ago

5.04 score 2 stars 4 scripts 564 downloads

geneHummus - A Pipeline to Define Gene Families in Legumes and Beyond

A pipeline with high specificity and sensitivity in extracting proteins from the RefSeq database (National Center for Biotechnology Information). Manual identification of gene families is highly time-consuming and laborious, requiring an iterative process of manual and computational analysis to identify members of a given family. The pipelines implements an automatic approach for the identification of gene families based on the conserved domains that specifically define that family. See Die et al. (2018) <doi:10.1101/436659> for more information and examples.

Last updated 4 years ago

4.15 score 7 stars 3 scripts 187 downloads

airqualityES - Air Quality Measurements in Spain from 2011 to 2018

These dataset contains daily quality air measurements in Spain over a period of 18 years (from 2001 to 2018). The measurements refer to several pollutants. These data are openly published by the Government of Spain. The datasets were originally spread over a number of files and formats. Here, the same information is contained in simple dataframe for convenience of researches, journalists or general public. See the Spanish Government website for more information.

Last updated 5 years ago

2.70 score 3 scripts 669 downloads